This isn't "modern" fingering. It was a relic of the finger technique for the first keyboard instruments, where the "white" keys were physically too short to make "passing the thumb over or under" a convenient way to play scales.
It's not too difficult to play this type of fingering evenly, especially on a harpsichord which has a "hair-trigger" touch compared with a modern piano, the note sounds during the top 25% of the key depression, not at the bottom of the key stroke like a piano, and the loudness of each note is not affected (at least to any significant degree) by the speed at which the key is depressed.
But even does not mean legato in the sense that later piano technique uses the term.
On instruments like the harpsichord and organ, with no dynamics, articulation is the most important tool the performer has to define rhythm. Playing everything "legato" on a harpsichord (or even worse, on an organ in a building with a very resonant acoustic) simply produces a shapeless mush of sound.
It is certainly valuable to research such original fingerings and understand how they "work" on the original instruments, but since the piano is very different mechanically from the instruments that Bach was using, there is little point in trying to slavishly use the same fingering IMO. What matters is that you produce the same effect, so far as that is possible on a piano.
This is played on organ not harpsichord, but the reason for including it here is that it clearly shows just how NON-legato the fingering technique is, compared with the sound it produces.