I generally agree with Michael Curtis's answer: most (though not all) modern harmony textbooks tend to assume "chord root" motion when speaking of a "falling fifths" sequence. When speaking about figured bass patterns, however, it's more typical to reference an actual bass line.
So, a progression like I-IV-viio-iii-vi-ii-V-I will often be regarded as "descending fifths" in many textbooks, regardless of what inversion the chords may be in.
I would, however, note a detail about the specific example offered in the question. It's very typical for such a sequential pattern to break out of the literal fifths in the bass to move toward a cadence like this, as it produces a stereotypical 4-5-1 (that is, fa-sol-do) bass pattern. This particular three-note motion dates back many centuries as a standard cadential bass pattern, and it's much more common than a 2-5-1 (re-sol-do) pattern.
Thus, you'll see "descending fifths sequences" almost always break the bass pattern near a cadence to do this if resolving to tonic. This pattern is even more critical for Neapolitan chords, which (as the question notes) are a variant of a supertonic chord. But having the bass continue in the fifth pattern would result in a tritone leap (from A-flat to D-natural). Classical counterpoint would generally frown on such leaps unless they are "resolved" melodically.
This is one reason the Neapolitan chord itself is often specifically called the "Neapolitan-sixth" and almost always appears in "first inversion." It's not really a functional "flat-II" chord in older styles, instead just being a predominant harmony that's chromatically altered.
In sum, with this particular chord, you'll almost always see a break in any descending fifths pattern anyway. But the broader context of moving toward a cadence, and making a 4-5-1 bass line, is the general underlying assumption determining the bass line here.